Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate synthase | A8M77_07600 | Not Available | Negative | 1544306 - 1545784 | 53746.2 |
| glutamate synthase subunit alpha | A8M77_07605 | Not Available | Negative | 1545953 - 1550695 | 172568.0 |
| transposase | A8M77_07610 | Not Available | Negative | 1550865 - 1551557 | 25826.8 |
| sam-dependent methyltransferase | A8M77_07615 | Not Available | Negative | 1551559 - 1552425 | 32041.7 |
| peptidase | A8M77_07620 | Not Available | Negative | 1552422 - 1552997 | 20783.2 |
| mfs transporter | A8M77_07625 | Not Available | Negative | 1552994 - 1554268 | 43233.9 |
| deoxyguanosinetriphosphate triphosphohydrolase | A8M77_07630 | Not Available | Negative | 1554265 - 1555395 | 42788.6 |
| 3-dehydroquinate synthase | A8M77_07635 | Not Available | Negative | 1555410 - 1556510 | 39018.5 |
| shikimate kinase | A8M77_07640 | Not Available | Negative | 1556547 - 1557092 | 20168.3 |
| secretin | A8M77_07645 | Not Available | Negative | 1557118 - 1559262 | 76336.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
