Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_07295 | Not Available | Negative | 1488754 - 1489302 | 19063.0 |
| rna polymerase subunit sigma-24 | A8M77_07300 | Not Available | Positive | 1489466 - 1490059 | 22623.3 |
| rna polymerase subunit sigma-70 | A8M77_07305 | Not Available | Positive | 1490070 - 1490822 | 26591.3 |
| gdsl family lipase | A8M77_07310 | Not Available | Positive | 1490928 - 1491704 | 28558.2 |
| group 1 glycosyl transferase | A8M77_07320 | Not Available | Negative | 1492887 - 1494128 | 45768.6 |
| alpha-2-macroglobulin | A8M77_07325 | Not Available | Positive | 1494239 - 1500286 | 218087.0 |
| type iv-a pilus assembly atpase pilb | A8M77_07330 | Not Available | Positive | 1500649 - 1502382 | 62662.6 |
| type ii secretion system protein f | A8M77_07335 | Not Available | Positive | 1502398 - 1503624 | 44586.9 |
| methyltransferase | A8M77_07340 | Not Available | Positive | 1503624 - 1504475 | 30383.6 |
| dephospho-coa kinase | A8M77_07345 | Not Available | Positive | 1504495 - 1505073 | 20451.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
