Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2fe-2s ferredoxin | A8M77_07145 | Not Available | Negative | 1449635 - 1450000 | 13366.9 |
| had family hydrolase | A8M77_07150 | Not Available | Negative | 1450011 - 1450679 | 24478.1 |
| ribosomal large subunit pseudouridine synthase c | A8M77_07155 | Not Available | Negative | 1450672 - 1451718 | 38229.5 |
| ribonuclease e | A8M77_07160 | Not Available | Positive | 1452259 - 1455210 | 107790.0 |
| udp-phosphate galactose phosphotransferase | A8M77_07165 | Not Available | Positive | 1455754 - 1456476 | 27550.4 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | A8M77_07170 | Not Available | Positive | 1456473 - 1457912 | 52078.4 |
| gdp-fucose synthetase | A8M77_07175 | Not Available | Positive | 1457972 - 1458940 | 35560.4 |
| hypothetical protein | A8M77_07180 | Not Available | Positive | 1458959 - 1459933 | 35517.2 |
| hypothetical protein | A8M77_07185 | Not Available | Positive | 1459989 - 1461338 | 48068.8 |
| transferase | A8M77_07190 | Not Available | Positive | 1461335 - 1462498 | 43033.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
