Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | A8M77_06365 | Not Available | Negative | 1279425 - 1280384 | 33622.9 |
| abc transporter substrate-binding protein | A8M77_06370 | Not Available | Negative | 1280381 - 1281355 | 34344.8 |
| dihydroxy-acid dehydratase | A8M77_06375 | Not Available | Positive | 1281534 - 1283270 | 63048.3 |
| 2-dehydro-3-deoxygalactonokinase | A8M77_06380 | Not Available | Positive | 1283302 - 1284198 | 31740.3 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | A8M77_06385 | Not Available | Positive | 1284290 - 1284931 | 21292.2 |
| hypothetical protein | A8M77_06390 | Not Available | Positive | 1284941 - 1285708 | 27799.3 |
| short-chain dehydrogenase | A8M77_06395 | Not Available | Negative | 1285785 - 1286486 | 23846.4 |
| mate family efflux transporter | A8M77_06400 | Not Available | Negative | 1286525 - 1287931 | 48575.8 |
| mfs transporter | A8M77_06405 | Not Available | Negative | 1287939 - 1289195 | 42676.4 |
| marr family transcriptional regulator | A8M77_06410 | Not Available | Negative | 1289188 - 1289652 | 17044.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
