Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polar amino acid abc transporter permease | A8M77_06265 | Not Available | Positive | 1259728 - 1260384 | 23724.6 |
| amino acid abc transporter permease | A8M77_06270 | Not Available | Positive | 1260395 - 1261048 | 23572.6 |
| amino acid abc transporter atp-binding protein | A8M77_06275 | Not Available | Positive | 1261032 - 1261817 | 28290.9 |
| duf1439 domain-containing protein | A8M77_06280 | Not Available | Positive | 1261854 - 1262456 | 22090.7 |
| glycerophosphodiester phosphodiesterase | A8M77_06285 | Not Available | Positive | 1262453 - 1263436 | 35627.6 |
| merr family transcriptional regulator | A8M77_06290 | Not Available | Negative | 1263441 - 1263911 | 17309.6 |
| cation transporter | A8M77_06295 | Not Available | Positive | 1263970 - 1264614 | 22118.0 |
| peptidase s58 | A8M77_06300 | Not Available | Positive | 1264658 - 1265692 | 34428.4 |
| c4-dicarboxylate abc transporter substrate-binding protein | A8M77_06305 | Not Available | Positive | 1265782 - 1267116 | 49487.0 |
| hypothetical protein | A8M77_06310 | Not Available | Negative | 1267113 - 1268216 | 39120.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
