Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-isopropylmalate dehydrogenase | A8M77_06010 | Not Available | Positive | 1206489 - 1207577 | 39037.9 |
| aspartate-semialdehyde dehydrogenase | A8M77_06015 | Not Available | Positive | 1207670 - 1208812 | 40564.3 |
| multidrug transporter subunit mdtc | A8M77_06025 | Not Available | Negative | 1210523 - 1213588 | 108871.0 |
| efflux transporter periplasmic adaptor subunit | A8M77_06030 | Not Available | Negative | 1213653 - 1214939 | 45338.4 |
| hypothetical protein | A8M77_06035 | Not Available | Positive | 1215180 - 1215701 | 18749.8 |
| hypothetical protein | A8M77_06040 | Not Available | Positive | 1215768 - 1216061 | 10997.5 |
| histidine kinase | A8M77_06045 | Not Available | Positive | 1216070 - 1217140 | 38285.1 |
| dna-binding response regulator | A8M77_06050 | Not Available | Positive | 1217137 - 1217976 | 30332.6 |
| hypothetical protein | A8M77_06055 | Not Available | Negative | 1218062 - 1218388 | 11682.8 |
| glutamine--trna ligase | A8M77_06060 | Not Available | Positive | 1218525 - 1220324 | 67068.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
