Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase, cytochrome b556 subunit | A8M77_05960 | Not Available | Positive | 1197809 - 1198255 | 16552.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | A8M77_05965 | Not Available | Positive | 1198269 - 1198634 | 13749.2 |
| succinate dehydrogenase flavoprotein subunit | A8M77_05970 | Not Available | Positive | 1198722 - 1200530 | 66024.6 |
| succinate dehydrogenase iron-sulfur subunit | A8M77_05975 | Not Available | Positive | 1200627 - 1201328 | 26633.3 |
| hypothetical protein | A8M77_05980 | Not Available | Positive | 1201350 - 1201652 | 11439.8 |
| citrate (si)-synthase | A8M77_05985 | Not Available | Positive | 1201677 - 1202987 | 48590.8 |
| entericidin | A8M77_05990 | Not Available | Positive | 1203108 - 1203248 | 4939.09 |
| lysr family transcriptional regulator | A8M77_05995 | Not Available | Positive | 1203373 - 1204317 | 34036.2 |
| 3-isopropylmalate dehydratase large subunit | A8M77_06000 | Not Available | Positive | 1204366 - 1205787 | 51027.9 |
| 3-isopropylmalate dehydratase small subunit | A8M77_06005 | Not Available | Positive | 1205806 - 1206456 | 24286.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
