Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | A8M77_05505 | Not Available | Negative | 1106095 - 1106751 | 24118.2 |
| hypothetical protein | A8M77_05510 | Not Available | Negative | 1106829 - 1108121 | 47630.9 |
| sugar transporter | A8M77_05515 | Not Available | Positive | 1108277 - 1108816 | 20019.2 |
| c4-dicarboxylate abc transporter | A8M77_05520 | Not Available | Positive | 1108864 - 1110405 | 55270.4 |
| hypothetical protein | A8M77_05525 | Not Available | Positive | 1110402 - 1110863 | 17303.2 |
| abc transporter substrate-binding protein | A8M77_05530 | Not Available | Negative | 1110897 - 1111976 | 39649.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | A8M77_05535 | Not Available | Negative | 1112070 - 1113965 | 67703.6 |
| polyprenyl synthetase | A8M77_05540 | Not Available | Negative | 1113971 - 1114897 | 31935.4 |
| exodeoxyribonuclease vii small subunit | A8M77_05545 | Not Available | Negative | 1114894 - 1115157 | 9330.02 |
| rieske (2fe-2s) protein | A8M77_05550 | Not Available | Positive | 1115408 - 1116541 | 43248.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
