Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A8M77_00360 | Not Available | Negative | 61192 - 64512 | 121275.0 |
| citrate transporter | A8M77_00365 | Not Available | Negative | 64601 - 65716 | 39715.9 |
| 4-coumarate--coa ligase | A8M77_00370 | Not Available | Negative | 65697 - 67241 | 55536.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 67393 - 67719 | Not Available |
| lipoyl synthase | A8M77_00375 | Not Available | Negative | 67261 - 68241 | 36572.0 |
| lipoate--protein ligase | A8M77_00380 | Not Available | Negative | 68261 - 68935 | 24291.3 |
| hypothetical protein | A8M77_00385 | Not Available | Negative | 68932 - 69249 | 11550.7 |
| d-amino acid aminotransferase | A8M77_00390 | Not Available | Negative | 69246 - 70151 | 32593.4 |
| atp synthase subunit i | A8M77_00395 | Not Available | Positive | 70323 - 70814 | 17630.0 |
| f0f1 atp synthase subunit a | A8M77_00400 | Not Available | Positive | 70828 - 71688 | 31143.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
