Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase | A8M77_05345 | Not Available | Negative | 1076212 - 1076874 | 24146.7 |
| lysr family transcriptional regulator | A8M77_05350 | Not Available | Positive | 1076946 - 1077926 | 36078.5 |
| patatin | A8M77_05355 | Not Available | Negative | 1077859 - 1078974 | 40508.3 |
| d-amino acid dehydrogenase small subunit | A8M77_05360 | Not Available | Negative | 1079048 - 1080349 | 47156.7 |
| asnc family transcriptional regulator | A8M77_05365 | Not Available | Positive | 1080480 - 1080947 | 17763.8 |
| hypothetical protein | A8M77_05370 | Not Available | Negative | 1080926 - 1082356 | 50861.5 |
| hypothetical protein | A8M77_05375 | Not Available | Positive | 1082716 - 1083198 | 17513.2 |
| radical sam protein | A8M77_05385 | Not Available | Positive | 1084274 - 1085389 | 39495.4 |
| histone acetyltransferase | A8M77_05390 | Not Available | Positive | 1085410 - 1085991 | 21329.6 |
| hypothetical protein | A8M77_05395 | Not Available | Positive | 1086051 - 1087121 | 37102.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
