Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate mutase | A8M77_05040 | Not Available | Positive | 1018428 - 1019546 | 40392.1 |
| prephenate dehydrogenase | A8M77_05045 | Not Available | Positive | 1019557 - 1020435 | 30931.2 |
| cytidylate kinase | A8M77_05050 | Not Available | Positive | 1020437 - 1022434 | 71452.9 |
| 30s ribosomal protein s1 | A8M77_05055 | Not Available | Positive | 1022597 - 1024285 | 61771.8 |
| integration host factor subunit beta | A8M77_05060 | Not Available | Positive | 1024329 - 1024649 | 11929.2 |
| hypothetical protein | A8M77_05065 | Not Available | Positive | 1024682 - 1025002 | 11279.9 |
| lipopolysaccharide assembly protein lapb | A8M77_05070 | Not Available | Positive | 1024992 - 1026176 | 43882.8 |
| hypothetical protein | A8M77_05075 | Not Available | Positive | 1026307 - 1026654 | 12098.6 |
| c4-dicarboxylate abc transporter substrate-binding protein | A8M77_05080 | Not Available | Positive | 1026817 - 1027785 | 34780.7 |
| c4-dicarboxylate abc transporter permease | A8M77_05085 | Not Available | Positive | 1027848 - 1028381 | 19725.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
