Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. JS1663 |
| Strain | JS1663_0140 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1167690 bp
Thymine Count
1173867 bp
Guanine Count
2494286 bp
Cytosine Count
2488518 bp
Genome Length
7324361 bp
Protein-coding Genes
6611 genes
Non-Coding Genes
94 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulation protein nr(i) | A8M77_04940 | Not Available | Negative | 996600 - 998108 | 54877.8 |
| pas domain-containing sensor histidine kinase | A8M77_04945 | Not Available | Negative | 998129 - 999205 | 39953.0 |
| hypothetical protein | A8M77_04950 | Not Available | Negative | 999205 - 999711 | 18169.4 |
| type i glutamate--ammonia ligase | A8M77_04955 | Not Available | Negative | 999851 - 1001266 | 52390.2 |
| damage-inducible protein | A8M77_04960 | Not Available | Negative | 1001416 - 1002216 | 29096.2 |
| hypothetical protein | A8M77_04965 | Not Available | Negative | 1002213 - 1003085 | 31552.4 |
| fatty acid hydroxylase | A8M77_04970 | Not Available | Negative | 1003123 - 1004094 | 37087.7 |
| peptidase a8 | A8M77_04975 | Not Available | Negative | 1004113 - 1004913 | 28955.5 |
| hypothetical protein | A8M77_04980 | Not Available | Negative | 1004900 - 1005844 | 34213.0 |
| 16s rrna pseudouridine(516) synthase | A8M77_04985 | Not Available | Negative | 1005924 - 1006676 | 27611.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
