Planctopirus hydrillae strain JC280

Gram-negativeCocciMotileaerobic

Kingdom

Pseudomonadati

Phylum

Planctomycetota

Class

Planctomycetia

Order

Planctomycetales

Family

Planctomycetaceae

Genus

Planctopirus

Description

Planctopirus hydrillae strain JC280 is a Gram-negative bacterium characterized by its cocci shape and the presence of flagella. This strain has been assigned the accession number LYDR00000000.1, which indicates its sequence data is available for further research and analysis. One notable trait of Planctopirus hydrillae strain JC280 is its single replicon, which suggests a streamlined genomic organization typical of certain aquatic bacteria. The presence of flagella is significant as it implies motility, allowing the bacterium to navigate through its aquatic environment, potentially aiding in colonization and interaction with other microorganisms. Understanding the characteristics of Planctopirus hydrillae strain JC280 contributes to the broader knowledge of microbial diversity in aquatic ecosystems. Its cocci shape and motility may play a role in nutrient cycling and the dynamics of microbial communities in freshwater habitats, particularly those associated with hydrilla plants. The specific traits of this strain highlight its potential ecological role and adaptability in its niche, marking it as an interesting subject for further microbiological and ecological studies.

Taxonomy

KingdomPseudomonadati
PhylumPlanctomycetota
ClassPlanctomycetia
OrderPlanctomycetales
FamilyPlanctomycetaceae
GenusPlanctopirus
SpeciesPlanctopirus hydrillae
Strainstrain JC280

Profile

Physiology
Gram staining propertiesNegative
ShapeCocci
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Planctopirus hydrillae strain JC280
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementAggregates
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Planctopirus hydrillae strain JC280 Contig98, whole genome shotgun

Gene Summary

Adenine Count

1331327 bp

Thymine Count

1326176 bp

Guanine Count

1540834 bp

Cytosine Count

1551906 bp

Genome Length

5750243 bp

Protein-coding Genes

4491 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA6X21_00895Not AvailablePositive5144255 - 514475218008.8
ribose 5-phosphate isomerase bA6X21_00900Not AvailablePositive5144752 - 514521016820.0
glycine cleavage system protein hA6X21_00905Not AvailablePositive5145635 - 514602113720.2
glycine dehydrogenase (aminomethyl-transferring)A6X21_00910Not AvailablePositive5146230 - 514758548727.8
glycine dehydrogenase (aminomethyl-transferring)A6X21_00915Not AvailablePositive5147730 - 514920553425.7
hypothetical proteinA6X21_00920Not AvailablePositive5149422 - 515016227543.1
hypothetical proteinA6X21_00925Not AvailablePositive5150651 - 515169436443.2
hypothetical proteinA6X21_00930Not AvailablePositive5151937 - 51521467961.43
hypothetical proteinA6X21_00935Not AvailablePositive5152242 - 515281121610.0
hypothetical proteinA6X21_00940Not AvailablePositive5152864 - 515382034445.3

Displaying genes 4031 – 4040 of 4491 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.