Sphingobium sp. SA916

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SA916 is characterized by the presence of flagella, indicating its potential for motility. This trait may facilitate its movement in various environments, contributing to its ecological adaptability. The organism has a single replicon, which suggests a streamlined genomic architecture that may enhance its survivability and efficiency in resource utilization. The genomic data for Sphingobium sp. SA916 is available under the accession number LXYF00000000.1, which provides a basis for further genomic analysis and comparisons with other species within the Sphingobium genus. The presence of flagella and the single replicon suggest that Sphingobium sp. SA916 could be well-adapted to specific ecological niches, potentially allowing it to thrive in environments where motility is advantageous. This organism may play a role in biogeochemical cycles, particularly in environments where its motility allows it to access substrates that are critical for its growth and survival. Thus, Sphingobium sp. SA916 exemplifies how structural features such as flagella can influence ecological interactions and contribute to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SA916
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SA916 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4669 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-carboxymuconolactone decarboxylaseA8G00_20290Not AvailablePositive3769795 - 377018114430.2
laci family transcriptional regulatorA8G00_20295Not AvailableNegative3770364 - 377134135482.5
hypothetical proteinA8G00_20300Not AvailableNegative3771517 - 377245534382.6
2-dehydro-3-deoxyglucarate aldolaseA8G00_20305Not AvailableNegative3772472 - 377324827356.9
hypothetical proteinA8G00_20310Not AvailableNegative3773259 - 377416133916.8
tonb-dependent receptorA8G00_20315Not AvailableNegative3774191 - 3777121104185.0
hypothetical proteinA8G00_20320Not AvailablePositive3777670 - 377904648638.5
3-keto-5-aminohexanoate cleavage proteinA8G00_20325Not AvailableNegative3779156 - 378008233569.7
hypothetical proteinA8G00_20330Not AvailablePositive3780166 - 378062116009.0
hypothetical proteinA8G00_20335Not AvailableNegative3780609 - 378142130537.3

Displaying genes 3471 – 3480 of 4755 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.