Sphingobium sp. SA916

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SA916 is characterized by the presence of flagella, indicating its potential for motility. This trait may facilitate its movement in various environments, contributing to its ecological adaptability. The organism has a single replicon, which suggests a streamlined genomic architecture that may enhance its survivability and efficiency in resource utilization. The genomic data for Sphingobium sp. SA916 is available under the accession number LXYF00000000.1, which provides a basis for further genomic analysis and comparisons with other species within the Sphingobium genus. The presence of flagella and the single replicon suggest that Sphingobium sp. SA916 could be well-adapted to specific ecological niches, potentially allowing it to thrive in environments where motility is advantageous. This organism may play a role in biogeochemical cycles, particularly in environments where its motility allows it to access substrates that are critical for its growth and survival. Thus, Sphingobium sp. SA916 exemplifies how structural features such as flagella can influence ecological interactions and contribute to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SA916
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SA916 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4669 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide-methionine (r)-s-oxide reductaseA8G00_19680Not AvailablePositive3638395 - 363879914859.0
penicillin-binding proteinA8G00_19685Not AvailablePositive3638956 - 364103174497.3
hypothetical proteinA8G00_19690Not AvailableNegative3641203 - 364215934417.2
transcription termination factor rhoA8G00_19695Not AvailablePositive3642416 - 364367246393.1
hypothetical proteinA8G00_19700Not AvailablePositive3643807 - 364452624949.3
quinone oxidoreductaseA8G00_19710Not AvailableNegative3645749 - 364669932879.4
carboxymethylenebutenolidaseA8G00_19715Not AvailableNegative3646733 - 364743125234.0
hypothetical proteinA8G00_19720Not AvailablePositive3647590 - 36478509295.3
trna uridine(34) 5-carboxymethylaminomethyl synthesis gtpase mnmeA8G00_19725Not AvailablePositive3647872 - 364915545392.3
trna uridine(34) 5-carboxymethylaminomethyl synthesis enzyme mnmgA8G00_19730Not AvailablePositive3649215 - 365106565985.1

Displaying genes 3371 – 3380 of 4755 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.