Sphingobium sp. SA916

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SA916 is characterized by the presence of flagella, indicating its potential for motility. This trait may facilitate its movement in various environments, contributing to its ecological adaptability. The organism has a single replicon, which suggests a streamlined genomic architecture that may enhance its survivability and efficiency in resource utilization. The genomic data for Sphingobium sp. SA916 is available under the accession number LXYF00000000.1, which provides a basis for further genomic analysis and comparisons with other species within the Sphingobium genus. The presence of flagella and the single replicon suggest that Sphingobium sp. SA916 could be well-adapted to specific ecological niches, potentially allowing it to thrive in environments where motility is advantageous. This organism may play a role in biogeochemical cycles, particularly in environments where its motility allows it to access substrates that are critical for its growth and survival. Thus, Sphingobium sp. SA916 exemplifies how structural features such as flagella can influence ecological interactions and contribute to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SA916
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SA916 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4669 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidaseA8G00_04470Not AvailableNegative2776054 - 277645513819.6
pseudouridine synthaseA8G00_04475Not AvailablePositive2776473 - 277743834521.9
rna polymerase factor sigma-32A8G00_04480Not AvailablePositive2777514 - 277842834599.6
monofunctional biosynthetic peptidoglycan transglycosylaseA8G00_04485Not AvailablePositive2778633 - 277932825494.2
tonb-dependent receptorA8G00_04490Not AvailableNegative2779378 - 2782707118699.0
atp-dependent protease atp-binding subunit clpxA8G00_04495Not AvailableNegative2783073 - 278434145826.3
atp-dependent clp endopeptidase, proteolytic subunit clppA8G00_04500Not AvailableNegative2784477 - 278511223395.3
glycosyl transferaseA8G00_04505Not AvailableNegative2785226 - 278620335704.7
trigger factorA8G00_04510Not AvailableNegative2786450 - 278806358483.1
Trna-leuNot AvailableNot AvailablePositive2788133 - 2788217Not Available

Displaying genes 2601 – 2610 of 4755 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.