Sphingobium sp. SA916

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. SA916 is characterized by the presence of flagella, indicating its potential for motility. This trait may facilitate its movement in various environments, contributing to its ecological adaptability. The organism has a single replicon, which suggests a streamlined genomic architecture that may enhance its survivability and efficiency in resource utilization. The genomic data for Sphingobium sp. SA916 is available under the accession number LXYF00000000.1, which provides a basis for further genomic analysis and comparisons with other species within the Sphingobium genus. The presence of flagella and the single replicon suggest that Sphingobium sp. SA916 could be well-adapted to specific ecological niches, potentially allowing it to thrive in environments where motility is advantageous. This organism may play a role in biogeochemical cycles, particularly in environments where its motility allows it to access substrates that are critical for its growth and survival. Thus, Sphingobium sp. SA916 exemplifies how structural features such as flagella can influence ecological interactions and contribute to the overall dynamics of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. SA916
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. SA916 contig-123_99, whole genome shotgun

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

4669 genes

Non-Coding Genes

85 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
redox-regulated atpase ychfA8G00_04220Not AvailablePositive2720361 - 272146139402.9
dna-deoxyinosine glycosylaseA8G00_04225Not AvailablePositive2721468 - 272199218870.9
phosphodiesteraseA8G00_04230Not AvailablePositive2722039 - 272331345836.4
acyl dehydrataseA8G00_04235Not AvailablePositive2723364 - 272382817103.5
hypothetical proteinA8G00_04240Not AvailableNegative2723830 - 272433617401.2
dna mismatch repair protein mutlA8G00_04245Not AvailableNegative2724424 - 272619663606.5
rod shape-determining proteinA8G00_04250Not AvailablePositive2726343 - 272738936801.6
rod shape-determining protein mrecA8G00_04255Not AvailablePositive2727399 - 272831632225.9
rod shape-determining protein mredA8G00_04260Not AvailablePositive2728313 - 272884019705.9
penicillin-binding protein 2A8G00_04265Not AvailablePositive2728837 - 273090674197.4

Displaying genes 2551 – 2560 of 4755 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.