Candidatus Nitrosopelagicus brevis strain U25

Kingdom

Thermoproteati

Phylum

Nitrososphaerota

Class

Order

Family

Genus

Candidatus Nitrosopelagicus

Description

Candidatus Nitrosopelagicus brevis strain U25 is a notable member of the microbial community due to its singular replicon, indicating a streamlined genetic structure. The organism is documented under the accession number LXWN00000000.1, which provides a reference for its genomic sequence and associated data within scientific databases. As a member of the larger group of ammonia-oxidizing archaea, Candidatus Nitrosopelagicus brevis strain U25 plays a crucial role in the nitrogen cycle, particularly in marine environments. Its unique adaptation to pelagic ecosystems suggests it contributes to nitrification processes in open ocean waters, which are essential for maintaining the balance of nitrogen compounds in these habitats. The presence of this strain highlights the diversity of ammonia-oxidizing microorganisms and their importance in biogeochemical cycles. The ecological significance of Candidatus Nitrosopelagicus brevis strain U25 lies in its potential to influence nutrient availability and primary productivity in marine ecosystems. Understanding its role can provide insights into the dynamics of marine microbial communities and their responses to environmental changes.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Candidatus Nitrosopelagicus brevis strain U25

Gene Summary

Adenine Count

415356 bp

Thymine Count

416936 bp

Guanine Count

205070 bp

Cytosine Count

208182 bp

Genome Length

1245544 bp

Protein-coding Genes

1421 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chromosome segregation protein scpaA7X95_06995Not AvailableNegative1180627 - 118129525657.3
zinc-binding alcohol dehydrogenaseA7X95_07000Not AvailablePositive1181390 - 118244537436.3
hypothetical proteinA7X95_07010Not AvailablePositive1182666 - 118327723567.8
translation initiation factor if-5aA7X95_07015Not AvailablePositive1183312 - 118372514942.1
atp-binding proteinA7X95_07020Not AvailablePositive1183810 - 118449926234.2
signal recognition particleA7X95_07025Not AvailablePositive1184492 - 118581748809.2
cytidine deaminaseA7X95_07030Not AvailableNegative1185814 - 118657828140.3
3-isopropylmalate dehydrataseA7X95_07035Not AvailablePositive1186651 - 118792245686.3
3-isopropylmalate dehydratase small subunitA7X95_07040Not AvailablePositive1187919 - 118840117814.3
3-isopropylmalate dehydratase large subunitA7X95_07045Not AvailablePositive1188410 - 118981951748.4

Displaying genes 1391 – 1400 of 1465 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.