Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transposase | A7Q26_04780 | Not Available | Positive | 1078197 - 1078523 | 12482.7 |
| transposase | A7Q26_04785 | Not Available | Positive | 1078517 - 1079425 | 33901.6 |
| hypothetical protein | A7Q26_04790 | Not Available | Negative | 1079745 - 1079972 | 7678.47 |
| phospholipase | A7Q26_04795 | Not Available | Negative | 1080313 - 1081527 | 43718.1 |
| beta-ketoacyl-acp reductase | A7Q26_04800 | Not Available | Positive | 1082462 - 1083184 | 24901.8 |
| acetyl-coa acetyltransferase | A7Q26_04805 | Not Available | Positive | 1083209 - 1084393 | 40830.2 |
| lps export abc transporter atp-binding protein | A7Q26_04810 | Not Available | Positive | 1084567 - 1085331 | 27212.4 |
| beta-ketoacyl-acp reductase | A7Q26_04815 | Not Available | Positive | 1085473 - 1086201 | 25474.4 |
| hypothetical protein | A7Q26_04820 | Not Available | Positive | 1086304 - 1086732 | 15196.0 |
| rnd transporter | A7Q26_04825 | Not Available | Positive | 1086895 - 1088292 | 50517.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

