Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | A7Q26_04675 | Not Available | Positive | 1057186 - 1058331 | 41185.9 |
| 2-nitropropane dioxygenase | A7Q26_04680 | Not Available | Positive | 1058423 - 1059826 | 51366.9 |
| hypothetical protein | A7Q26_04685 | Not Available | Positive | 1059838 - 1060053 | 7937.33 |
| glyoxalase | A7Q26_04690 | Not Available | Positive | 1060436 - 1060816 | 13185.8 |
| formyltetrahydrofolate deformylase | A7Q26_04695 | Not Available | Negative | 1061186 - 1062052 | 32141.6 |
| succinylglutamate-semialdehyde dehydrogenase | A7Q26_04700 | Not Available | Negative | 1062086 - 1063498 | 48750.2 |
| duf1338 domain-containing protein | A7Q26_04705 | Not Available | Negative | 1063501 - 1064529 | 37128.2 |
| lysr family transcriptional regulator | A7Q26_04710 | Not Available | Positive | 1064618 - 1065520 | 32819.4 |
| hypothetical protein | A7Q26_04715 | Not Available | Negative | 1065538 - 1066524 | 34482.3 |
| chromosome partitioning protein para | A7Q26_04720 | Not Available | Positive | 1066717 - 1067436 | 25316.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

