Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | A7Q26_04465 | Not Available | Positive | 1016070 - 1016819 | 26295.5 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | A7Q26_04470 | Not Available | Positive | 1016844 - 1017875 | 37614.1 |
| hypothetical protein | A7Q26_04475 | Not Available | Positive | 1018132 - 1018383 | 8888.65 |
| hypothetical protein | A7Q26_04480 | Not Available | Negative | 1018388 - 1018726 | 12266.6 |
| hypothetical protein | A7Q26_04485 | Not Available | Negative | 1018840 - 1019763 | 35567.6 |
| nudix hydrolase | A7Q26_04495 | Not Available | Positive | 1020145 - 1020945 | 28722.2 |
| extensin | A7Q26_04500 | Not Available | Positive | 1020949 - 1021674 | 26318.5 |
| anthranilate synthase component i | A7Q26_04505 | Not Available | Negative | 1021690 - 1023192 | 53268.7 |
| peptidylprolyl isomerase | A7Q26_04510 | Not Available | Negative | 1023227 - 1025176 | 69202.8 |
| triose-phosphate isomerase | A7Q26_04515 | Not Available | Positive | 1025379 - 1026140 | 26196.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

