Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sam-dependent methyltransferase | A7Q26_04415 | Not Available | Positive | 1006884 - 1007657 | 26984.3 |
| xylan 1,4-beta-xylosidase | A7Q26_04420 | Not Available | Negative | 1007615 - 1009300 | 61625.7 |
| hypothetical protein | A7Q26_04425 | Not Available | Negative | 1009371 - 1009775 | 14257.5 |
| phosphoribosylformylglycinamidine synthase ii | A7Q26_04430 | Not Available | Negative | 1010194 - 1012383 | 76497.3 |
| hypothetical protein | A7Q26_04435 | Not Available | Positive | 1012569 - 1012892 | 12392.7 |
| hypothetical protein | A7Q26_04440 | Not Available | Negative | 1012915 - 1013391 | 18002.2 |
| hypothetical protein | A7Q26_04445 | Not Available | Negative | 1013672 - 1014055 | 13150.7 |
| exodeoxyribonuclease vii small subunit | A7Q26_04450 | Not Available | Positive | 1014270 - 1014524 | 9074.57 |
| farnesyl-diphosphate synthase | A7Q26_04455 | Not Available | Positive | 1014529 - 1015443 | 32596.2 |
| pantetheine-phosphate adenylyltransferase | A7Q26_04460 | Not Available | Positive | 1015447 - 1015959 | 18684.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

