Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidate cytidylyltransferase | A7Q26_04315 | Not Available | Positive | 988689 - 989468 | 26706.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | A7Q26_04320 | Not Available | Positive | 989465 - 990622 | 40147.4 |
| rip metalloprotease rsep | A7Q26_04325 | Not Available | Positive | 990619 - 991752 | 40186.5 |
| outer membrane protein assembly factor bama | A7Q26_04330 | Not Available | Positive | 991840 - 994488 | 98232.8 |
| hypothetical protein | A7Q26_04335 | Not Available | Positive | 994488 - 995144 | 22572.1 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | A7Q26_04340 | Not Available | Positive | 995151 - 995627 | 17052.0 |
| 50s ribosomal protein l31 | A7Q26_04345 | Not Available | Positive | 995815 - 996039 | 8216.68 |
| 3-dehydroquinate synthase | A7Q26_04350 | Not Available | Negative | 996301 - 997407 | 39001.8 |
| shikimate kinase | A7Q26_04355 | Not Available | Negative | 997398 - 997946 | 20187.6 |
| hypothetical protein | A7Q26_04360 | Not Available | Positive | 998044 - 998232 | 7010.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

