Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crossover junction endodeoxyribonuclease ruvc | A7Q26_20900 | Not Available | Positive | 101219 - 101710 | 16791.5 |
| hypothetical protein | A7Q26_20905 | Not Available | Negative | 101759 - 102037 | 10406.4 |
| padr family transcriptional regulator | A7Q26_20910 | Not Available | Negative | 102041 - 102688 | 23492.1 |
| threonine synthase | A7Q26_20915 | Not Available | Negative | 102782 - 104023 | 44795.0 |
| nucleotide exchange factor grpe | A7Q26_20920 | Not Available | Negative | 104195 - 104749 | 19885.5 |
| heat-inducible transcriptional repressor hrca | A7Q26_20925 | Not Available | Negative | 104746 - 105789 | 37012.8 |
| hypothetical protein | A7Q26_20930 | Not Available | Negative | 105821 - 106330 | 18185.0 |
| ribonuclease ph | A7Q26_20935 | Not Available | Positive | 106425 - 107141 | 25494.5 |
| non-canonical purine ntp pyrophosphatase, rdgb/ham1 family | A7Q26_20940 | Not Available | Positive | 107274 - 107903 | 22229.3 |
| fis family transcriptional regulator | A7Q26_20945 | Not Available | Negative | 107915 - 108475 | 20371.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

