Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase | A7Q26_04265 | Not Available | Negative | 979317 - 980930 | 60048.2 |
| isocitrate dehydrogenase | A7Q26_04270 | Not Available | Negative | 981040 - 982263 | 45947.7 |
| phosphatidylserine decarboxylase | A7Q26_04275 | Not Available | Positive | 982424 - 983158 | 26483.6 |
| cdp-diacylglycerol o-phosphatidyltransferase | A7Q26_04280 | Not Available | Positive | 983367 - 984095 | 26091.2 |
| hypothetical protein | A7Q26_04285 | Not Available | Negative | 984099 - 984326 | 8135.2 |
| 30s ribosomal protein s2 | A7Q26_04290 | Not Available | Positive | 984582 - 985340 | 27244.8 |
| translation elongation factor ts | A7Q26_04295 | Not Available | Positive | 985452 - 986378 | 31502.7 |
| ump kinase | A7Q26_04300 | Not Available | Positive | 986609 - 987334 | 25774.1 |
| ribosome recycling factor | A7Q26_04305 | Not Available | Positive | 987342 - 987899 | 20262.3 |
| di-trans,poly-cis-decaprenylcistransferase | A7Q26_04310 | Not Available | Positive | 987944 - 988684 | 27036.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

