Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion system protein | A7Q26_24185 | Not Available | Negative | 939011 - 940507 | 51843.3 |
| flp pilus assembly protein cpab | A7Q26_24190 | Not Available | Negative | 940509 - 941522 | 34464.6 |
| peptidase | A7Q26_24195 | Not Available | Negative | 941574 - 942047 | 17014.8 |
| lysophospholipase | A7Q26_24200 | Not Available | Positive | 942099 - 943082 | 36541.6 |
| fad-dependent oxidoreductase | A7Q26_24205 | Not Available | Positive | 943115 - 944182 | 37531.9 |
| transposase | A7Q26_24215 | Not Available | Negative | 944973 - 945251 | 10662.0 |
| acyl-coa dehydrogenase | A7Q26_24220 | Not Available | Negative | 945845 - 947581 | 61390.6 |
| acyl-coa dehydrogenase | A7Q26_24225 | Not Available | Negative | 947602 - 948756 | 42212.7 |
| 2-nitropropane dioxygenase | A7Q26_24230 | Not Available | Negative | 948753 - 949694 | 33185.7 |
| hypothetical protein | A7Q26_24235 | Not Available | Negative | 949811 - 949996 | 6927.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

