Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calcium-binding protein | A7Q26_24135 | Not Available | Positive | 926958 - 927182 | 7537.58 |
| hypothetical protein | A7Q26_24140 | Not Available | Positive | 927256 - 928980 | 63474.2 |
| hypothetical protein | A7Q26_24145 | Not Available | Negative | 928992 - 929690 | 24359.8 |
| hypothetical protein | A7Q26_24150 | Not Available | Positive | 930697 - 933297 | 97159.3 |
| duf4145 domain-containing protein | A7Q26_24155 | Not Available | Positive | 933371 - 934027 | 24108.4 |
| hypothetical protein | A7Q26_24160 | Not Available | Negative | 934131 - 934667 | 19137.1 |
| pilus assembly protein tadc | A7Q26_24165 | Not Available | Negative | 934983 - 935972 | 35814.5 |
| pilus assembly protein tadb | A7Q26_24170 | Not Available | Negative | 935990 - 936988 | 36646.0 |
| pilus assembly protein cpae | A7Q26_24175 | Not Available | Negative | 937050 - 938333 | 45921.3 |
| pilus assembly protein cpad | A7Q26_24180 | Not Available | Negative | 938335 - 938994 | 22720.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

