Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein ureg | A7Q26_23815 | Not Available | Positive | 857115 - 857756 | 22767.6 |
| hybrid sensor histidine kinase/response regulator | A7Q26_23820 | Not Available | Positive | 857756 - 861124 | 121722.0 |
| dna-binding response regulator | A7Q26_23825 | Not Available | Positive | 861121 - 862041 | 32742.6 |
| pyridoxal-5'-phosphate-dependent protein | A7Q26_23830 | Not Available | Negative | 862082 - 863071 | 34100.0 |
| efflux transporter periplasmic adaptor subunit | A7Q26_23835 | Not Available | Positive | 863343 - 864341 | 35726.0 |
| abc transporter permease | A7Q26_23840 | Not Available | Positive | 864338 - 865588 | 44650.6 |
| abc transporter atp-binding protein | A7Q26_23845 | Not Available | Positive | 865585 - 866277 | 24471.6 |
| hypothetical protein | A7Q26_23850 | Not Available | Negative | 866287 - 867066 | 25382.5 |
| hypothetical protein | A7Q26_23855 | Not Available | Negative | 867074 - 867595 | 18056.4 |
| transcriptional regulator | A7Q26_23860 | Not Available | Negative | 867601 - 867915 | 11886.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

