Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase | A7Q26_23765 | Not Available | Negative | 847192 - 849375 | 76483.9 |
| (2fe-2s)-binding protein | A7Q26_23770 | Not Available | Negative | 849372 - 849842 | 16225.6 |
| hypothetical protein | A7Q26_23775 | Not Available | Negative | 849905 - 850477 | 20287.0 |
| arginase | A7Q26_23780 | Not Available | Positive | 850811 - 852298 | 53200.6 |
| urease accessory protein ured | A7Q26_23785 | Not Available | Positive | 852410 - 853267 | 30505.1 |
| urease subunit gamma | A7Q26_23790 | Not Available | Positive | 853275 - 853577 | 10943.5 |
| urease subunit beta | A7Q26_23795 | Not Available | Positive | 853693 - 853998 | 10828.9 |
| urease subunit alpha | A7Q26_23800 | Not Available | Positive | 854000 - 855712 | 60607.9 |
| urease accessory protein uree | A7Q26_23805 | Not Available | Positive | 855930 - 856448 | 18754.0 |
| urease accessory protein uref | A7Q26_23810 | Not Available | Positive | 856438 - 857118 | 23870.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

