Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit alpha | A7Q26_04025 | Not Available | Positive | 787121 - 790072 | 105651.0 |
| sarcosine oxidase subunit gamma | A7Q26_04030 | Not Available | Positive | 790119 - 790574 | 15524.4 |
| formyltetrahydrofolate deformylase | A7Q26_04035 | Not Available | Positive | 790587 - 791444 | 31705.2 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase | A7Q26_04040 | Not Available | Positive | 791449 - 792336 | 30858.7 |
| xre family transcriptional regulator | A7Q26_04045 | Not Available | Positive | 792445 - 793044 | 21398.7 |
| glutamine amidotransferase | A7Q26_04050 | Not Available | Positive | 793131 - 794006 | 31272.0 |
| protein glxc | A7Q26_04055 | Not Available | Positive | 794006 - 794695 | 23886.2 |
| glutamate synthase | A7Q26_04060 | Not Available | Positive | 794706 - 796034 | 47153.4 |
| type iii glutamate--ammonia ligase | A7Q26_04065 | Not Available | Positive | 796172 - 797467 | 47364.4 |
| hypothetical protein | A7Q26_04075 | Not Available | Negative | 798945 - 800162 | 45149.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

