Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | A7Q26_03920 | Not Available | Negative | 766025 - 766648 | 22118.9 |
| pas domain-containing sensor histidine kinase | A7Q26_03925 | Not Available | Negative | 766638 - 768173 | 56347.3 |
| duf305 domain-containing protein | A7Q26_03930 | Not Available | Negative | 768233 - 768706 | 17642.2 |
| copper resistance protein copb | A7Q26_03935 | Not Available | Negative | 768797 - 769945 | 41228.5 |
| copper-binding protein | A7Q26_03940 | Not Available | Negative | 769945 - 771870 | 69503.4 |
| rna polymerase subunit sigma-24 | A7Q26_03945 | Not Available | Negative | 771937 - 772503 | 20739.0 |
| heavy metal resistance protein | A7Q26_03950 | Not Available | Negative | 772500 - 772940 | 16398.8 |
| hypothetical protein | A7Q26_03955 | Not Available | Negative | 772940 - 773212 | 9383.47 |
| copper resistance protein copc | A7Q26_03960 | Not Available | Positive | 773346 - 773723 | 13099.1 |
| copper resistance protein copd | A7Q26_03965 | Not Available | Positive | 773728 - 774672 | 32605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

