Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxybutyryl-coa dehydrogenase | A7Q26_03710 | Not Available | Positive | 720753 - 721619 | 30489.3 |
| oleate hydratase | A7Q26_03715 | Not Available | Positive | 721647 - 723413 | 66546.3 |
| copper-translocating p-type atpase | A7Q26_03720 | Not Available | Positive | 723455 - 725944 | 86919.3 |
| tetr family transcriptional regulator | A7Q26_03725 | Not Available | Positive | 726053 - 726619 | 19991.1 |
| transposase | A7Q26_03730 | Not Available | Negative | 727096 - 728211 | 41674.6 |
| hypothetical protein | A7Q26_03740 | Not Available | Positive | 730168 - 730605 | 15856.0 |
| integrase | A7Q26_03745 | Not Available | Positive | 730728 - 731966 | 44703.9 |
| type ii restriction endonuclease | A7Q26_03750 | Not Available | Negative | 732088 - 733383 | 47430.5 |
| copper-binding protein | A7Q26_03755 | Not Available | Negative | 733632 - 734036 | 13578.4 |
| cation transporter | A7Q26_03760 | Not Available | Negative | 734033 - 737176 | 113323.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

