Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_03550 | Not Available | Positive | 690205 - 690477 | 9551.72 |
| merr family transcriptional regulator | A7Q26_03555 | Not Available | Negative | 690537 - 691007 | 18033.7 |
| dicarboxylate--coa ligase pima | A7Q26_03560 | Not Available | Negative | 691089 - 692750 | 61215.5 |
| aromatic hydrocarbon degradation protein | A7Q26_03565 | Not Available | Negative | 692765 - 694072 | 45754.7 |
| hypothetical protein | A7Q26_03570 | Not Available | Negative | 694105 - 694509 | 14615.5 |
| hypothetical protein | A7Q26_03575 | Not Available | Negative | 694721 - 695365 | 24068.5 |
| acetyl-coa acetyltransferase | A7Q26_03580 | Not Available | Positive | 695648 - 696784 | 38497.4 |
| 3-hydroxyacyl-coa dehydrogenase | A7Q26_03585 | Not Available | Positive | 696781 - 699132 | 83144.9 |
| acyl-coa dehydrogenase | A7Q26_03590 | Not Available | Positive | 699178 - 700968 | 64539.4 |
| 2-nitropropane dioxygenase | A7Q26_03595 | Not Available | Positive | 700965 - 701873 | 31550.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

