Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| energy-dependent translational throttle protein etta | A7Q26_23515 | Not Available | Positive | 636223 - 637908 | 62665.4 |
| cytochrome-c peroxidase | A7Q26_23520 | Not Available | Negative | 638079 - 639083 | 34800.5 |
| rod shape-determining protein roda | A7Q26_23530 | Not Available | Negative | 639474 - 640586 | 39920.2 |
| penicillin-binding protein 2 | A7Q26_23535 | Not Available | Negative | 640583 - 642655 | 74653.8 |
| rod shape-determining protein mred | A7Q26_23540 | Not Available | Negative | 642652 - 643179 | 19701.0 |
| rod shape-determining protein mrec | A7Q26_23545 | Not Available | Negative | 643176 - 644087 | 31923.4 |
| rod shape-determining protein | A7Q26_23550 | Not Available | Negative | 644104 - 645150 | 36770.5 |
| dna mismatch repair protein mutl | A7Q26_23555 | Not Available | Positive | 645309 - 647111 | 64559.3 |
| hypothetical protein | A7Q26_23560 | Not Available | Positive | 647116 - 647601 | 16372.0 |
| lysine transporter lyse | A7Q26_23565 | Not Available | Negative | 647686 - 648312 | 22293.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

