Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein traj | A7Q26_23400 | Not Available | Positive | 610474 - 611157 | 25149.7 |
| conjugal transfer protein | A7Q26_23405 | Not Available | Positive | 611154 - 611996 | 31043.8 |
| hypothetical protein | A7Q26_23410 | Not Available | Positive | 611998 - 613266 | 44351.3 |
| p-type dna transfer atpase virb11 | A7Q26_23415 | Not Available | Positive | 613263 - 614255 | 36354.9 |
| conjugal transfer protein trag | A7Q26_23420 | Not Available | Positive | 614233 - 616149 | 71095.1 |
| hypothetical protein | A7Q26_23425 | Not Available | Positive | 616139 - 617317 | 43218.2 |
| hypothetical protein | A7Q26_23430 | Not Available | Positive | 617357 - 617806 | 16801.3 |
| hypothetical protein | A7Q26_23435 | Not Available | Positive | 617866 - 618096 | 8310.84 |
| integrase | A7Q26_23445 | Not Available | Positive | 620500 - 621939 | 54169.1 |
| aaa family atpase | A7Q26_23450 | Not Available | Positive | 621936 - 622781 | 31117.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

