Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_23295 | Not Available | Positive | 595842 - 596330 | 17147.5 |
| hypothetical protein | A7Q26_23300 | Not Available | Positive | 596420 - 596620 | 7044.22 |
| duf4440 domain-containing protein | A7Q26_23305 | Not Available | Negative | 596635 - 597102 | 16684.8 |
| rna polymerase subunit sigma-24 | A7Q26_23310 | Not Available | Negative | 597310 - 597882 | 21192.5 |
| heavy metal resistance protein | A7Q26_23315 | Not Available | Negative | 597879 - 598298 | 15309.3 |
| hypothetical protein | A7Q26_23320 | Not Available | Negative | 598319 - 598603 | 9441.64 |
| tonb-dependent receptor | A7Q26_23325 | Not Available | Negative | 599188 - 601332 | 77703.2 |
| hypothetical protein | A7Q26_23330 | Not Available | Positive | 601626 - 602000 | 13312.7 |
| copg family transcriptional regulator | A7Q26_23335 | Not Available | Positive | 602038 - 602433 | 15138.9 |
| integrase | A7Q26_23340 | Not Available | Positive | 602430 - 603392 | 35277.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

