Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator repa | A7Q26_23245 | Not Available | Negative | 584185 - 585288 | 42252.6 |
| hypothetical protein | A7Q26_23250 | Not Available | Negative | 587095 - 587388 | 11103.6 |
| conjugal transfer protein trag | A7Q26_23255 | Not Available | Negative | 587884 - 589107 | 44405.2 |
| hypothetical protein | A7Q26_23260 | Not Available | Negative | 589454 - 589735 | 10137.2 |
| hypothetical protein | A7Q26_23265 | Not Available | Negative | 589716 - 590048 | 12380.5 |
| hypothetical protein | A7Q26_23270 | Not Available | Negative | 590120 - 590848 | 25015.0 |
| conjugal transfer protein trad | A7Q26_23275 | Not Available | Negative | 590845 - 591072 | 8439.05 |
| conjugal transfer protein trac | A7Q26_23280 | Not Available | Negative | 591110 - 591412 | 10397.3 |
| ti-type conjugative transfer relaxase traa | A7Q26_23285 | Not Available | Positive | 591585 - 594689 | 113509.0 |
| hypothetical protein | A7Q26_23290 | Not Available | Positive | 594704 - 595414 | 26009.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

