Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrolase | A7Q26_23085 | Not Available | Positive | 544941 - 546098 | 42669.4 |
| cyclase | A7Q26_23090 | Not Available | Positive | 546095 - 546874 | 28583.6 |
| fumarylacetoacetate hydrolase | A7Q26_23095 | Not Available | Positive | 546877 - 547836 | 34792.5 |
| 5-dehydro-4-deoxyglucarate dehydratase | A7Q26_23100 | Not Available | Positive | 548150 - 549070 | 32683.3 |
| lysr family transcriptional regulator | A7Q26_23105 | Not Available | Positive | 549115 - 550002 | 32505.6 |
| carboxylesterase | A7Q26_23110 | Not Available | Positive | 549981 - 551555 | 56825.1 |
| hypothetical protein | A7Q26_23115 | Not Available | Negative | 551602 - 553437 | 68501.3 |
| glucarate transporter | A7Q26_23120 | Not Available | Negative | 553437 - 554771 | 47057.4 |
| tonb-dependent receptor | A7Q26_23125 | Not Available | Positive | 555055 - 557844 | 99722.6 |
| hypothetical protein | A7Q26_23130 | Not Available | Negative | 558287 - 559588 | 46490.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

