Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_22810 | Not Available | Positive | 472145 - 473806 | 63008.3 |
| hypothetical protein | A7Q26_22815 | Not Available | Positive | 473809 - 474963 | 43586.6 |
| hypothetical protein | A7Q26_22820 | Not Available | Positive | 475410 - 475820 | 15742.3 |
| transposase | A7Q26_22840 | Not Available | Positive | 478285 - 478575 | 10944.3 |
| lysr family transcriptional regulator | A7Q26_22845 | Not Available | Negative | 479420 - 480316 | 33010.7 |
| aldehyde oxidase | A7Q26_22850 | Not Available | Positive | 480460 - 481443 | 35540.2 |
| 2,5-diketo-d-gluconic acid reductase | A7Q26_22855 | Not Available | Positive | 481465 - 482322 | 31984.0 |
| duf4440 domain-containing protein | A7Q26_22860 | Not Available | Positive | 482502 - 482927 | 15687.8 |
| carboxymuconolactone decarboxylase | A7Q26_22865 | Not Available | Positive | 482959 - 484128 | 41061.2 |
| atpase | A7Q26_22870 | Not Available | Negative | 484455 - 485183 | 26703.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

