Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_22495 | Not Available | Positive | 410626 - 411015 | 13775.4 |
| heparinase | A7Q26_22500 | Not Available | Negative | 411038 - 412789 | 62689.4 |
| ribulose-phosphate 3-epimerase | A7Q26_22505 | Not Available | Negative | 412804 - 413466 | 23662.7 |
| diguanylate cyclase | A7Q26_22510 | Not Available | Negative | 413557 - 414048 | 18137.0 |
| sam-dependent methyltransferase | A7Q26_22515 | Not Available | Negative | 414103 - 415437 | 47013.5 |
| hypothetical protein | A7Q26_22520 | Not Available | Negative | 415463 - 415777 | 11329.1 |
| protease htpx | A7Q26_22525 | Not Available | Negative | 415777 - 416706 | 32483.5 |
| hypothetical protein | A7Q26_22530 | Not Available | Positive | 417146 - 417589 | 16420.1 |
| utp--glucose-1-phosphate uridylyltransferase | A7Q26_22535 | Not Available | Positive | 417678 - 418556 | 31601.3 |
| single-stranded dna-binding protein | A7Q26_22540 | Not Available | Negative | 418654 - 419238 | 19892.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

