Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | A7Q26_20640 | Not Available | Negative | 37260 - 38135 | 32618.7 |
| kinase | A7Q26_20645 | Not Available | Negative | 38288 - 39544 | 45367.7 |
| integrase | A7Q26_20650 | Not Available | Negative | 40043 - 41257 | 46127.0 |
| hypothetical protein | A7Q26_20660 | Not Available | Positive | 41658 - 42959 | 46658.6 |
| glutamate dehydrogenase | A7Q26_20665 | Not Available | Positive | 43283 - 47947 | 167397.0 |
| hypothetical protein | A7Q26_20675 | Not Available | Positive | 49321 - 49965 | 23124.1 |
| hypothetical protein | A7Q26_20680 | Not Available | Positive | 49978 - 50502 | 18612.4 |
| abc transporter permease | A7Q26_20685 | Not Available | Positive | 50516 - 51406 | 30990.8 |
| thiamine biosynthesis protein apbe | A7Q26_20690 | Not Available | Positive | 51517 - 52383 | 30636.7 |
| kinase | A7Q26_20695 | Not Available | Negative | 52422 - 53234 | 28828.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

