Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hemerythrin | A7Q26_22030 | Not Available | Negative | 318541 - 319053 | 18970.6 |
| hypothetical protein | A7Q26_22035 | Not Available | Negative | 319168 - 319569 | 15389.2 |
| hypothetical protein | A7Q26_22040 | Not Available | Negative | 319747 - 320214 | 16339.6 |
| glutathione-dependent formaldehyde dehydrogenase | A7Q26_22045 | Not Available | Negative | 320357 - 321550 | 43178.9 |
| cyclase | A7Q26_22050 | Not Available | Negative | 321550 - 322143 | 21905.0 |
| hybrid sensor histidine kinase/response regulator | A7Q26_22055 | Not Available | Positive | 322655 - 325339 | 97531.4 |
| serine/threonine protein kinase | A7Q26_22060 | Not Available | Positive | 325573 - 327012 | 52443.3 |
| histidine kinase | A7Q26_22065 | Not Available | Positive | 327009 - 328085 | 38800.8 |
| histidine kinase | A7Q26_22070 | Not Available | Positive | 328082 - 328465 | 13765.4 |
| damage-inducible protein cina | A7Q26_22075 | Not Available | Positive | 328572 - 329126 | 19249.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

