Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid replication initiator repa | A7Q26_20575 | Not Available | Positive | 26037 - 27140 | 42276.5 |
| hypothetical protein | A7Q26_20580 | Not Available | Negative | 27185 - 27469 | 9615.52 |
| phosphopantetheine--protein transferase | A7Q26_20585 | Not Available | Negative | 27469 - 28104 | 22522.1 |
| damage-inducible protein | A7Q26_20595 | Not Available | Positive | 29273 - 29554 | 10290.3 |
| addiction module toxin rele | A7Q26_20600 | Not Available | Positive | 29523 - 29843 | 12238.7 |
| phosphoglycerate mutase | A7Q26_20605 | Not Available | Positive | 29846 - 30466 | 22811.1 |
| recombinase | A7Q26_20610 | Not Available | Negative | 30500 - 31045 | 19375.2 |
| resolvase | A7Q26_20620 | Not Available | Negative | 32369 - 33235 | 32170.6 |
| transposase | A7Q26_20625 | Not Available | Negative | 33378 - 36287 | 109016.0 |
| hypothetical protein | A7Q26_20635 | Not Available | Positive | 36844 - 37179 | 12353.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

