Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase s14 | A7Q26_11365 | Not Available | Positive | 2456955 - 2457530 | 21126.8 |
| hypothetical protein | A7Q26_11370 | Not Available | Positive | 2457663 - 2458295 | 22537.8 |
| hypothetical protein | A7Q26_11375 | Not Available | Negative | 2458284 - 2458565 | 10688.5 |
| protein-s-isoprenylcysteine methyltransferase | A7Q26_11380 | Not Available | Positive | 2458700 - 2459992 | 48108.5 |
| glutamate--cysteine ligase | A7Q26_11385 | Not Available | Negative | 2459996 - 2461369 | 50939.4 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | A7Q26_11390 | Not Available | Negative | 2461469 - 2462215 | 26873.5 |
| 4-hydroxybenzoate polyprenyltransferase | A7Q26_11395 | Not Available | Positive | 2462299 - 2463204 | 32594.4 |
| phospholipase | A7Q26_11400 | Not Available | Positive | 2463201 - 2464655 | 54807.1 |
| aminotransferase | A7Q26_11405 | Not Available | Negative | 2464662 - 2465771 | 39282.9 |
| chromosome segregation protein smc | A7Q26_11410 | Not Available | Negative | 2465849 - 2469292 | 121633.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

