Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_11315 | Not Available | Positive | 2446551 - 2446811 | 9786.74 |
| hypothetical protein | A7Q26_11320 | Not Available | Negative | 2446808 - 2447632 | 29497.9 |
| phosphoesterase | A7Q26_11325 | Not Available | Positive | 2447697 - 2448356 | 23909.6 |
| tonb-dependent receptor | A7Q26_11330 | Not Available | Positive | 2448545 - 2451343 | 98399.1 |
| yggs family pyridoxal phosphate enzyme | A7Q26_11335 | Not Available | Negative | 2451321 - 2452067 | 26227.6 |
| thiamine phosphate synthase | A7Q26_11340 | Not Available | Positive | 2452090 - 2452680 | 21794.7 |
| gnat family acetyltransferase | A7Q26_11345 | Not Available | Negative | 2452677 - 2453177 | 18217.1 |
| amp-dependent synthetase | A7Q26_11350 | Not Available | Negative | 2453244 - 2454995 | 63203.4 |
| holliday junction dna helicase ruvb | A7Q26_11355 | Not Available | Negative | 2455187 - 2456206 | 36971.9 |
| holliday junction dna helicase ruva | A7Q26_11360 | Not Available | Negative | 2456203 - 2456811 | 20624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

