Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | A7Q26_11115 | Not Available | Negative | 2407295 - 2407615 | 11119.4 |
| hypothetical protein | A7Q26_11120 | Not Available | Negative | 2407750 - 2408448 | 25606.0 |
| lysr family transcriptional regulator | A7Q26_11125 | Not Available | Positive | 2408572 - 2409501 | 32864.1 |
| phosphotyrosine protein phosphatase | A7Q26_11130 | Not Available | Positive | 2409574 - 2410125 | 20370.9 |
| carboxylate--amine ligase | A7Q26_11135 | Not Available | Negative | 2410097 - 2411308 | 45264.9 |
| hypothetical protein | A7Q26_11140 | Not Available | Negative | 2411305 - 2412285 | 35435.7 |
| monooxygenase | A7Q26_11145 | Not Available | Negative | 2412432 - 2412929 | 17560.0 |
| malic enzyme | A7Q26_11150 | Not Available | Negative | 2413050 - 2415311 | 81115.1 |
| dna mismatch repair protein muts | A7Q26_11155 | Not Available | Positive | 2415450 - 2418101 | 93661.4 |
| bifunctional uridylyltransferase/uridylyl-removing protein | A7Q26_11160 | Not Available | Positive | 2418111 - 2420873 | 103400.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

