Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxyacid dehydrogenase | A7Q26_10905 | Not Available | Positive | 2368414 - 2369391 | 33846.0 |
| haloacid dehalogenase | A7Q26_10910 | Not Available | Negative | 2369388 - 2370035 | 24452.9 |
| abc transporter permease | A7Q26_10915 | Not Available | Positive | 2370164 - 2371273 | 39602.2 |
| abc transporter atp-binding protein | A7Q26_10920 | Not Available | Positive | 2371273 - 2372145 | 31593.8 |
| mammalian cell entry protein | A7Q26_10925 | Not Available | Positive | 2372149 - 2373111 | 34033.1 |
| abc transporter | A7Q26_10930 | Not Available | Positive | 2373129 - 2373740 | 20977.3 |
| aminopeptidase n | A7Q26_10935 | Not Available | Negative | 2374006 - 2376606 | 95805.4 |
| chromosome partitioning protein parb | A7Q26_10940 | Not Available | Negative | 2376706 - 2377638 | 34070.8 |
| chromosome partitioning protein para | A7Q26_10945 | Not Available | Negative | 2377635 - 2378417 | 28246.3 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | A7Q26_10950 | Not Available | Negative | 2378414 - 2379058 | 23347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

