Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal recognition particle protein | A7Q26_21555 | Not Available | Negative | 231069 - 232541 | 51721.7 |
| hypothetical protein | A7Q26_21560 | Not Available | Negative | 232735 - 233457 | 25672.9 |
| amino acid permease | A7Q26_21565 | Not Available | Positive | 233639 - 235033 | 48671.0 |
| hypothetical protein | A7Q26_21570 | Not Available | Positive | 235068 - 235667 | 21200.3 |
| diaminopimelate epimerase | A7Q26_21575 | Not Available | Positive | 235711 - 236511 | 28268.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | A7Q26_21580 | Not Available | Positive | 236515 - 237756 | 44868.1 |
| signal recognition particle-docking protein ftsy | A7Q26_21585 | Not Available | Positive | 237877 - 238809 | 33355.3 |
| septation protein ispz | A7Q26_21590 | Not Available | Positive | 238799 - 239461 | 23982.8 |
| superoxide dismutase | A7Q26_21595 | Not Available | Positive | 239630 - 240244 | 22486.4 |
| cation-binding protein | A7Q26_21600 | Not Available | Positive | 240374 - 240808 | 16465.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

