Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbl | A7Q26_10755 | Not Available | Positive | 2336008 - 2337318 | 43048.4 |
| conjugal transfer protein trbf | A7Q26_10760 | Not Available | Positive | 2337322 - 2338005 | 25400.0 |
| p-type conjugative transfer protein trbg | A7Q26_10765 | Not Available | Positive | 2338002 - 2339018 | 36032.8 |
| conjugal transfer protein trai | A7Q26_10770 | Not Available | Positive | 2339015 - 2340232 | 41861.7 |
| hypothetical protein | A7Q26_10775 | Not Available | Positive | 2340229 - 2340453 | 7789.56 |
| hypothetical protein | A7Q26_10780 | Not Available | Negative | 2340468 - 2340776 | 10643.9 |
| lipopolysaccharide biosynthesis protein | A7Q26_10785 | Not Available | Positive | 2341360 - 2342847 | 52583.1 |
| histidine kinase | A7Q26_10790 | Not Available | Negative | 2342861 - 2343289 | 15229.7 |
| hypothetical protein | A7Q26_10795 | Not Available | Positive | 2343366 - 2343665 | 11062.8 |
| acyl-coa thioesterase | A7Q26_10800 | Not Available | Positive | 2343643 - 2344029 | 13885.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

