Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TCM1 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
919009 bp
Thymine Count
920317 bp
Guanine Count
1654504 bp
Cytosine Count
1660416 bp
Genome Length
5154797 bp
Protein-coding Genes
2320 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase | A7Q26_10705 | Not Available | Positive | 2325349 - 2326257 | 30955.7 |
| type vi secretion protein | A7Q26_10710 | Not Available | Positive | 2326496 - 2328256 | 64039.3 |
| conjugal transfer protein trag | A7Q26_10715 | Not Available | Positive | 2328274 - 2330247 | 72193.5 |
| copg family transcriptional regulator | A7Q26_10720 | Not Available | Positive | 2330257 - 2330685 | 16131.2 |
| p-type conjugative transfer atpase trbb | A7Q26_10725 | Not Available | Positive | 2330859 - 2331845 | 34780.2 |
| conjugal transfer protein trbc | A7Q26_10730 | Not Available | Positive | 2331842 - 2332174 | 11329.0 |
| conjugal transfer protein | A7Q26_10735 | Not Available | Positive | 2332174 - 2332455 | 9950.27 |
| conjugal transfer protein trbe | A7Q26_10740 | Not Available | Positive | 2332452 - 2334941 | 91208.7 |
| p-type conjugative transfer protein trbj | A7Q26_10745 | Not Available | Positive | 2334938 - 2335696 | 27024.9 |
| conjugal transfer protein trbk | A7Q26_10750 | Not Available | Positive | 2335701 - 2336006 | 10773.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

